Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | EYR26_RS07945 | C5B7R5 | Negative | 1667713 - 1670079 | 87870.1 |
| rip metalloprotease rsep | EYR26_RS07950 | Q9PEI1 | Negative | 1670163 - 1671509 | 48308.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EYR26_RS07955 | B2SR05 | Negative | 1671536 - 1672726 | 40848.2 |
| phosphatidate cytidylyltransferase | EYR26_RS07960 | P0ABG2 | Negative | 1672729 - 1673556 | 28910.4 |
| polyprenyl diphosphate synthase | EYR26_RS07965 | Q5H1E5 | Negative | 1673553 - 1674314 | 27926.2 |
| ribosome recycling factor | EYR26_RS07970 | Q2P4A9 | Negative | 1674332 - 1674889 | 20353.5 |
| ump kinase | EYR26_RS07975 | Q2P4A8 | Negative | 1675070 - 1675792 | 25882.5 |
| ggdef domain-containing protein | EYR26_RS07980 | P77334 | Negative | 1675899 - 1677422 | 56250.5 |
| translation elongation factor ts | EYR26_RS07985 | Q2P4A6 | Negative | 1677699 - 1678577 | 31162.5 |
| 30s ribosomal protein s2 | EYR26_RS07990 | Q2P4A5 | Negative | 1678747 - 1679550 | 29492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

