Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector avirulence protein avrbs2 | EYR26_RS00255 | Not Available | Positive | 53874 - 56018 | 78583.0 |
| dipeptidase | EYR26_RS00260 | Not Available | Negative | 56513 - 57802 | 46417.4 |
| dead/deah box helicase | EYR26_RS00265 | P50830 | Negative | 58342 - 60837 | 90789.7 |
| hemolysin iii family protein | EYR26_RS00270 | P67155 | Positive | 61015 - 61677 | 24147.2 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | EYR26_RS00275 | Not Available | Positive | 61744 - 62001 | 9628.63 |
| dipeptidase | EYR26_RS24840 | Not Available | Positive | 61998 - 62285 | 10980.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 62349 - 62425 | Not Available |
| class 1 fructose-bisphosphatase | EYR26_RS00290 | Q8PR42 | Negative | 62941 - 63951 | 36667.7 |
| amino acid aminotransferase | EYR26_RS00295 | P72173 | Negative | 64222 - 65424 | 43139.5 |
| tonb-dependent receptor | EYR26_RS00300 | P76115 | Positive | 65580 - 67718 | 77168.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

