Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | EYR26_RS07685 | Not Available | Positive | 1616664 - 1617266 | 21845.2 |
| hypothetical protein | EYR26_RS07690 | Not Available | Positive | 1617302 - 1617910 | 22647.1 |
| oxidoreductase-like domain-containing protein | EYR26_RS07695 | Not Available | Positive | 1617970 - 1618164 | 6915.07 |
| virulence factor | EYR26_RS07700 | Not Available | Positive | 1618234 - 1619604 | 48502.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1619798 - 1619874 | Not Available |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | EYR26_RS07710 | C0H3X7 | Negative | 1620228 - 1622792 | 93021.5 |
| dipeptidase | EYR26_RS24280 | Not Available | Positive | 1623056 - 1623766 | 25268.2 |
| rida family protein | EYR26_RS07725 | O30825 | Positive | 1623777 - 1624124 | 12473.9 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | EYR26_RS07730 | Q5C9L6 | Negative | 1624286 - 1625356 | 40846.5 |
| duf1295 domain-containing protein | EYR26_RS07735 | Not Available | Negative | 1625374 - 1626156 | 28596.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

