Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS24275 | Not Available | Negative | 1601521 - 1601592 | 2944.43 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1601597 - 1601673 | Not Available |
| m48 family metallopeptidase | EYR26_RS07580 | P42597 | Negative | 1601831 - 1602358 | 20266.5 |
| duf1328 domain-containing protein | EYR26_RS07585 | Q2P4J0 | Positive | 1602760 - 1602933 | 5894.9 |
| duf2789 domain-containing protein | EYR26_RS07590 | Not Available | Negative | 1603094 - 1603348 | 9406.89 |
| dksa/trar family c4-type zinc finger protein | EYR26_RS07595 | P41039 | Positive | 1603523 - 1603789 | 9481.91 |
| mechanosensitive ion channel family protein | EYR26_RS07600 | Not Available | Negative | 1603980 - 1604570 | 21726.9 |
| rna polymerase sigma factor | EYR26_RS07605 | Not Available | Positive | 1604789 - 1605376 | 21340.4 |
| hypothetical protein | EYR26_RS07610 | Not Available | Positive | 1605373 - 1605900 | 18730.6 |
| duf4097 family beta strand repeat-containing protein | EYR26_RS07615 | Not Available | Positive | 1605912 - 1606790 | 30017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

