Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptochrome/photolyase family protein | EYR26_RS07475 | A9CH39 | Positive | 1579918 - 1581495 | 59727.8 |
| beta-n-acetylhexosaminidase | EYR26_RS07480 | Q2P4L0 | Positive | 1581613 - 1582617 | 34957.6 |
| hypoxanthine-guanine phosphoribosyltransferase | EYR26_RS07485 | Q839B2 | Positive | 1582617 - 1583171 | 20065.1 |
| s-methyl-5'-thioinosine phosphorylase | EYR26_RS07490 | Q8PB40 | Positive | 1583257 - 1584009 | 26209.5 |
| cold-shock protein | EYR26_RS07495 | P48859 | Positive | 1584096 - 1584302 | 7293.39 |
| nad(p)/fad-dependent oxidoreductase | EYR26_RS07500 | A8LVF4 | Positive | 1584397 - 1585662 | 46654.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1585722 - 1585795 | Not Available |
| ligase-associated dna damage response endonuclease pdem | EYR26_RS07510 | Not Available | Negative | 1585837 - 1586481 | 23662.7 |
| ligase-associated dna damage response dexh box helicase | EYR26_RS07515 | O27830 | Negative | 1586471 - 1588972 | 91596.5 |
| atp-dependent dna ligase | EYR26_RS07520 | Q1II25 | Negative | 1588969 - 1590573 | 59914.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

