Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dps family protein | EYR26_RS06705 | P73321 | Negative | 1382840 - 1383385 | 20206.8 |
| atp-dependent rna helicase hrpa | EYR26_RS06710 | P43329 | Positive | 1383487 - 1387608 | 152542.0 |
| tonb-dependent receptor | EYR26_RS06715 | Not Available | Negative | 1387829 - 1390465 | 95608.0 |
| dipeptidase | EYR26_RS06720 | Not Available | Negative | 1390566 - 1391601 | 36989.1 |
| phopq-activated pathogenicity-related family protein | EYR26_RS06725 | Not Available | Negative | 1391902 - 1393416 | 55267.8 |
| hypothetical protein | EYR26_RS06730 | Not Available | Negative | 1393846 - 1394358 | 18697.6 |
| pyrroloquinoline quinone biosynthesis protein pqqe | EYR26_RS06735 | Q2P4Y9 | Negative | 1394421 - 1395539 | 40830.9 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | EYR26_RS06740 | Q2P4Y8 | Negative | 1395536 - 1395814 | 10296.2 |
| pyrroloquinoline-quinone synthase pqqc | EYR26_RS06745 | Q5H233 | Negative | 1395811 - 1396563 | 28066.6 |
| pyrroloquinoline quinone biosynthesis protein pqqb | EYR26_RS06750 | Q2P4Y6 | Negative | 1396560 - 1397459 | 32326.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

