Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein transport protein | EYR26_RS00100 | P80603 | Negative | 20045 - 21403 | 47992.5 |
| rhomboid family intramembrane serine protease | EYR26_RS00105 | Not Available | Positive | 21622 - 22314 | 24992.2 |
| duf1820 family protein | EYR26_RS00110 | Not Available | Positive | 22431 - 22751 | 12083.5 |
| d-2-hydroxyacid dehydrogenase family protein | EYR26_RS00115 | Q9YAW4 | Positive | 22751 - 23743 | 35612.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 23969 - 24045 | Not Available |
| s41 family peptidase | EYR26_RS00125 | Q44879 | Negative | 24050 - 25573 | 52714.3 |
| murein hydrolase activator envc | EYR26_RS00130 | P37690 | Negative | 25678 - 26976 | 46431.4 |
| hypothetical protein | EYR26_RS00135 | Not Available | Positive | 27073 - 27729 | 22143.3 |
| m28 family metallopeptidase | EYR26_RS00140 | Not Available | Positive | 27902 - 29713 | 64651.3 |
| dipeptidase | EYR26_RS00145 | Not Available | Negative | 29870 - 30211 | 12040.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

