Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS06075 | Not Available | Positive | 1264378 - 1265420 | 37014.1 |
| hypothetical protein | EYR26_RS06080 | Not Available | Positive | 1265518 - 1265661 | 5195.98 |
| t6ss effector bth_i2691 family protein | EYR26_RS06085 | Not Available | Positive | 1265658 - 1268447 | 101795.0 |
| is5 family transposase | EYR26_RS06090 | Not Available | Negative | 1268406 - 1269782 | 52221.8 |
| putative type vi secretion system effector | EYR26_RS06095 | Not Available | Positive | 1270041 - 1270772 | 26474.2 |
| dipeptidase | EYR26_RS06100 | Not Available | Positive | 1270856 - 1271329 | 17420.6 |
| dipeptidase | EYR26_RS06105 | Not Available | Positive | 1271325 - 1271456 | 5150.98 |
| tonb-dependent vitamin b12 receptor | EYR26_RS06110 | Q6LLU3 | Positive | 1271977 - 1273854 | 67485.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1273916 - 1273990 | Not Available |
| hypothetical protein | EYR26_RS06120 | Not Available | Positive | 1274150 - 1274743 | 21715.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

