Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yafy family protein | EYR26_RS06025 | Not Available | Positive | 1251795 - 1252490 | 25326.8 |
| glutathione s-transferase family protein | EYR26_RS06030 | Not Available | Positive | 1252549 - 1253205 | 23577.2 |
| rna-binding s4 domain-containing protein | EYR26_RS06035 | Q44264 | Positive | 1253430 - 1253837 | 15052.0 |
| catalase/peroxidase hpi | EYR26_RS06040 | Q3BVY2 | Negative | 1253961 - 1256207 | 81897.6 |
| duf937 domain-containing protein | EYR26_RS06045 | Not Available | Negative | 1256638 - 1257252 | 20388.2 |
| dna mismatch repair protein muts | EYR26_RS06050 | Q5H2C5 | Negative | 1257524 - 1260079 | 93385.8 |
| dipeptidase | EYR26_RS06055 | Not Available | Negative | 1260362 - 1260511 | 5540.65 |
| giy-yig nuclease family protein | EYR26_RS06060 | Q2P644 | Negative | 1260519 - 1260824 | 11290.2 |
| atp-dependent chaperone clpb | EYR26_RS06065 | Q8PHQ4 | Positive | 1261266 - 1263851 | 95519.7 |
| hypothetical protein | EYR26_RS24245 | Not Available | Positive | 1263976 - 1264128 | 5300.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

