Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2235 domain-containing protein | EYR26_RS05965 | Not Available | Positive | 1241540 - 1243753 | 81978.2 |
| dipeptidase | EYR26_RS05975 | Not Available | Negative | 1244080 - 1245293 | 44082.7 |
| dipeptidase | EYR26_RS05980 | Q2FIF3 | Positive | 1245411 - 1246211 | 27369.6 |
| aminotransferase class iv family protein | EYR26_RS05985 | Not Available | Positive | 1246202 - 1246999 | 28893.0 |
| 30s ribosomal protein s16 | EYR26_RS05990 | Q2P653 | Positive | 1247109 - 1247366 | 9504.42 |
| ribosome maturation factor rimm | EYR26_RS05995 | Q2P652 | Positive | 1247410 - 1247922 | 19106.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EYR26_RS06000 | Q2P651 | Positive | 1247987 - 1248745 | 27928.3 |
| 50s ribosomal protein l19 | EYR26_RS06005 | Q2P650 | Positive | 1248890 - 1249297 | 14738.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1249689 - 1249756 | Not Available |
| mate family efflux transporter | EYR26_RS06015 | O34474 | Negative | 1249914 - 1251404 | 52661.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

