Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vgr family protein | EYR26_RS05865 | Not Available | Positive | 1216060 - 1219029 | 103926.0 |
| dna repair protein | EYR26_RS05870 | Not Available | Positive | 1219190 - 1222081 | 104921.0 |
| sumf1/egtb/pvdo family nonheme iron enzyme | EYR26_RS05875 | D1A7C3 | Negative | 1222134 - 1223096 | 35952.2 |
| type vi secretion system vgr family protein | EYR26_RS05880 | Not Available | Positive | 1223282 - 1225951 | 91924.8 |
| duf4123 domain-containing protein | EYR26_RS05885 | Not Available | Positive | 1225958 - 1226866 | 34332.0 |
| duf3304 domain-containing protein | EYR26_RS05890 | Not Available | Positive | 1226935 - 1227513 | 21075.2 |
| duf2235 domain-containing protein | EYR26_RS05895 | Not Available | Positive | 1227503 - 1228915 | 52623.3 |
| type vi secretion system vgr family protein | EYR26_RS05900 | Not Available | Positive | 1228925 - 1231351 | 83108.4 |
| duf4123 domain-containing protein | EYR26_RS05905 | Not Available | Positive | 1231357 - 1232172 | 29260.0 |
| duf3304 domain-containing protein | EYR26_RS05910 | Not Available | Positive | 1232165 - 1232761 | 21390.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

