Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | EYR26_RS05445 | P19704 | Positive | 1130492 - 1132813 | 85654.7 |
| is5-like element isxo1 family transposase | EYR26_RS05455 | Not Available | Positive | 1133187 - 1134155 | 36310.8 |
| xac0095 family protein | EYR26_RS05460 | Not Available | Positive | 1134361 - 1134627 | 10021.0 |
| xopau family type iii secretion system effector serine/threonine kinase | EYR26_RS05465 | Not Available | Negative | 1134876 - 1136450 | 57520.3 |
| type iii secretion system effector xopav | EYR26_RS05475 | Not Available | Positive | 1136859 - 1137608 | 26377.3 |
| type iii secretion system effector xopav | EYR26_RS05480 | Not Available | Positive | 1137964 - 1138719 | 26584.3 |
| tetr/acrr family transcriptional regulator | EYR26_RS05485 | Not Available | Negative | 1138780 - 1139409 | 23762.2 |
| dipeptidase | EYR26_RS05490 | Not Available | Positive | 1139617 - 1140264 | 23731.1 |
| dipeptidase | EYR26_RS05495 | Q8PBP3 | Positive | 1140264 - 1141133 | 28681.2 |
| hypothetical protein | EYR26_RS23945 | Not Available | Positive | 1141188 - 1141385 | 7406.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

