Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | EYR26_RS04885 | Q2P6Y2 | Positive | 1011100 - 1011552 | 16900.9 |
| dna polymerase iii subunit epsilon | EYR26_RS04890 | P03007 | Positive | 1011561 - 1012295 | 26804.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1012355 - 1012426 | Not Available |
| pp2c family serine/threonine-protein phosphatase | EYR26_RS04900 | O34779 | Negative | 1012731 - 1013435 | 25119.7 |
| Trna-ser | Not Available | Not Available | Positive | 1013632 - 1013722 | Not Available |
| duf6165 family protein | EYR26_RS04910 | Not Available | Positive | 1013978 - 1014382 | 15323.3 |
| glycosyltransferase family 9 protein | EYR26_RS04915 | Q57336 | Negative | 1014593 - 1015642 | 38455.4 |
| 3-deoxy-d-manno-octulosonic acid kinase | EYR26_RS04920 | Q2P6W5 | Positive | 1015663 - 1016412 | 28400.0 |
| mbl fold metallo-hydrolase | EYR26_RS04925 | P0DTL2 | Positive | 1016412 - 1017161 | 27541.7 |
| gtp 3',8-cyclase moaa | EYR26_RS04930 | Q8PNH1 | Positive | 1017161 - 1018192 | 37578.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

