Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Predicted capsid completion protein | EYR26_RS08920 | Not Available | Negative | 1849905 - 1850372 | 16739.7 |
| Terminase endonuclease subunit | EYR26_RS08925 | P25476 | Negative | 1850472 - 1851191 | 25407.5 |
| Major capsid protein, p2 family | EYR26_RS08930 | P25477 | Negative | 1851195 - 1852211 | 37195.1 |
| Gpo family capsid scaffolding protein | EYR26_RS08935 | P25478 | Negative | 1852258 - 1853100 | 30631.8 |
| Terminase large subunit | EYR26_RS08940 | P25479 | Positive | 1853243 - 1855006 | 66739.9 |
| Portal vertex protein | EYR26_RS08945 | Not Available | Positive | 1855006 - 1856028 | 37786.1 |
| Hypothetical protein | EYR26_RS08950 | Not Available | Positive | 1856054 - 1856299 | 9212.01 |
| Site-specific dna-methyltransferase | EYR26_RS08955 | Q9S4X2 | Positive | 1856217 - 1856918 | 25587.8 |
| imm52 family immunity protein | EYR26_RS08960 | Not Available | Negative | 1856985 - 1857737 | 27384.1 |
| tox-rease-5 domain-containing protein | EYR26_RS08965 | Not Available | Negative | 1857734 - 1858441 | 26367.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

