Verrucomicrobia bacterium S94

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Order

Family

Genus

Description

Verrucomicrobia bacterium S94 is characterized by having a single replicon, which is an important trait for its genomic organization. This bacterium is cataloged under the accession number NZ_CP036201.1, indicating its unique genetic sequence within the broader domain of Verrucomicrobia. Verrucomicrobia are known for their diverse metabolic capabilities and ecological roles, often found in various environments such as soil, freshwater, and marine ecosystems. The presence of a single replicon may suggest a streamlined genomic structure, potentially allowing for efficient replication and adaptation in its ecological niche. The ecological significance of Verrucomicrobia, including S94, lies in their contributions to nutrient cycling and their interactions with other microorganisms in their habitat. These bacteria may play a role in decomposing organic matter and contributing to soil health, thereby supporting plant growth and overall ecosystem functionality. Further research into the specific metabolic pathways and ecological interactions of Verrucomicrobia bacterium S94 could provide valuable insights into its role within microbial communities and its potential applications in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Verrucomicrobia bacterium S94 chromosome, complete genome.

Gene Summary

Adenine Count

991078 bp

Thymine Count

980819 bp

Guanine Count

1067426 bp

Cytosine Count

1068660 bp

Genome Length

4107983 bp

Protein-coding Genes

3565 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseEGM51_RS02105Not AvailablePositive476836 - 47829352769.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseEGM51_RS02110Not AvailablePositive478293 - 47963949415.6
phospho-n-acetylmuramoyl-pentapeptide- transferaseEGM51_RS02115Not AvailablePositive479723 - 48086241736.3
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseEGM51_RS02120Not AvailablePositive480862 - 48214546167.3
lysm peptidoglycan-binding domain-containing proteinEGM51_RS02125Not AvailablePositive482207 - 48315733264.1
putative lipid ii flippase ftswEGM51_RS02130Not AvailablePositive483178 - 48430541036.6
class i sam-dependent methyltransferaseEGM51_RS02135Not AvailablePositive484308 - 48515331900.1
rlua family pseudouridine synthaseEGM51_RS02140Not AvailablePositive485146 - 48583225640.8
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdEGM51_RS02145Not AvailableNegative485829 - 48727754173.3
nitroreductase family proteinEGM51_RS02150Not AvailablePositive487378 - 48788419307.2

Displaying genes 421 – 430 of 3640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.