Shewanella maritima strain D4-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella maritima strain D4-2 is a notable marine bacterium characterized by the presence of flagella, which facilitates motility in its aquatic environment. This strain possesses a single replicon, suggesting a streamlined genetic organization, which may contribute to its adaptability in marine ecosystems. The genomic information for this strain is cataloged under the accession number NZ_CP036200.1, providing a reference for further research and characterization. The motility conferred by the flagella allows Shewanella maritima strain D4-2 to navigate its environment effectively, potentially enhancing its interactions with various substrates and other microorganisms. This trait is especially significant in marine habitats, where nutrient availability and competition can fluctuate. The ability of marine Shewanella species to move toward nutrient-rich environments or away from unfavorable conditions can influence their ecological roles, including those related to biogeochemical cycles. In summary, the combination of flagella presence and a single replicon in Shewanella maritima strain D4-2 indicates a well-adapted organism capable of thriving in dynamic marine environments, underscoring its potential ecological impact in nutrient cycling and microbial community dynamics in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella maritima
Strainstrain D4-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella maritima strain D4-2 chromosome, complete genome.

Gene Summary

Adenine Count

1306342 bp

Thymine Count

1310367 bp

Guanine Count

1048817 bp

Cytosine Count

1052485 bp

Genome Length

4718011 bp

Protein-coding Genes

3924 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna isopentenyl-2-thiomethyl-a-37 hydroxylase miaeEXU30_RS16860Not AvailablePositive3979176 - 397994629187.0
udp-2,3-diacylglucosamine diphosphataseEXU30_RS16865Not AvailableNegative3979950 - 398066926939.5
peptidylprolyl isomeraseEXU30_RS16870Not AvailableNegative3980673 - 398116717851.0
cysteine--trna ligaseEXU30_RS16875Not AvailablePositive3981317 - 398269652013.4
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldEXU30_RS16880Not AvailableNegative3983111 - 398396530654.8
Trna-proNot AvailableNot AvailablePositive3984350 - 3984426Not Available
Trna-argNot AvailableNot AvailablePositive3984518 - 3984594Not Available
Trna-hisNot AvailableNot AvailablePositive3984603 - 3984678Not Available
trigger factorEXU30_RS16900Not AvailablePositive3984984 - 398628848155.0
atp-dependent clp endopeptidase proteolytic subunit clppEXU30_RS16905Not AvailablePositive3986379 - 398699022275.9

Displaying genes 3391 – 3400 of 4055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.