Shewanella maritima strain D4-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella maritima strain D4-2 is a notable marine bacterium characterized by the presence of flagella, which facilitates motility in its aquatic environment. This strain possesses a single replicon, suggesting a streamlined genetic organization, which may contribute to its adaptability in marine ecosystems. The genomic information for this strain is cataloged under the accession number NZ_CP036200.1, providing a reference for further research and characterization. The motility conferred by the flagella allows Shewanella maritima strain D4-2 to navigate its environment effectively, potentially enhancing its interactions with various substrates and other microorganisms. This trait is especially significant in marine habitats, where nutrient availability and competition can fluctuate. The ability of marine Shewanella species to move toward nutrient-rich environments or away from unfavorable conditions can influence their ecological roles, including those related to biogeochemical cycles. In summary, the combination of flagella presence and a single replicon in Shewanella maritima strain D4-2 indicates a well-adapted organism capable of thriving in dynamic marine environments, underscoring its potential ecological impact in nutrient cycling and microbial community dynamics in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella maritima
Strainstrain D4-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella maritima strain D4-2 chromosome, complete genome.

Gene Summary

Adenine Count

1306342 bp

Thymine Count

1310367 bp

Guanine Count

1048817 bp

Cytosine Count

1052485 bp

Genome Length

4718011 bp

Protein-coding Genes

3924 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific tyrosine recombinase xerdEXU30_RS13960Not AvailablePositive3265403 - 326633835192.1
bifunctional protein-disulfide isomerase/oxidoreductase dsbcEXU30_RS13965Not AvailablePositive3266465 - 326720226929.6
carboxy-s-adenosyl-l-methionine synthase cmoaEXU30_RS13970Not AvailablePositive3267538 - 326926161643.4
Trna-pheNot AvailableNot AvailablePositive3269488 - 3269563Not Available
efflux rnd transporter permease subunitEXU30_RS13980Not AvailablePositive3269884 - 327208882141.9
hypothetical proteinEXU30_RS13985Not AvailablePositive3272085 - 327282527924.2
3-oxoacyl-acp synthase iii family proteinEXU30_RS13990Not AvailablePositive3272816 - 327387738121.3
outer membrane protein assembly factor bamdEXU30_RS13995Not AvailableNegative3273981 - 327474228999.6
23s rrna pseudouridine(1911/1915/1917) synthase rludEXU30_RS14000Not AvailablePositive3274867 - 327584136444.8
peptidoglycan editing factor pgefEXU30_RS14005Not AvailablePositive3275841 - 327657226410.2

Displaying genes 2811 – 2820 of 4055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.