Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenocysteine-specific translation elongation factorEWM63_RS31080Not AvailablePositive7386487 - 738838867343.9
nipsnap family proteinEWM63_RS31090Not AvailableNegative7388577 - 738890913123.7
aspartate/glutamate racemase family proteinEWM63_RS31095Not AvailableNegative7388924 - 738959223698.7
vwa domain-containing proteinEWM63_RS31100Not AvailablePositive7390270 - 739177253478.9
hypothetical proteinEWM63_RS31105Not AvailableNegative7391797 - 739225815252.3
mbl fold metallo-hydrolaseEWM63_RS31110Not AvailableNegative7392408 - 739347236701.6
alpha/beta fold hydrolaseEWM63_RS31115Not AvailablePositive7393650 - 739447129801.3
yoak family proteinEWM63_RS31120Not AvailablePositive7394471 - 739516323970.1
tmem175 family proteinEWM63_RS31125Not AvailableNegative7395368 - 739593421157.5
putative bifunctional diguanylate cyclase/phosphodiesteraseEWM63_RS31130Not AvailablePositive7396165 - 739798266698.6

Displaying genes 6281 – 6290 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.