Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pfkb family carbohydrate kinaseEWM63_RS32485Not AvailableNegative4944388 - 494676384644.4
age family epimerase/isomeraseEWM63_RS21130Not AvailableNegative4946760 - 494796246346.8
laci family dna-binding transcriptional regulatorEWM63_RS21135Not AvailableNegative4948253 - 494925736080.1
sugar mfs transporterEWM63_RS21140Not AvailablePositive4949616 - 495089044373.3
glycoside hydrolase family 3 c-terminal domain-containing proteinEWM63_RS21145Not AvailablePositive4950989 - 495322379387.9
glycoside hydrolase 5 family proteinEWM63_RS21150Not AvailablePositive4953226 - 495453048803.9
gdsl-type esterase/lipase family proteinEWM63_RS21155Not AvailablePositive4954656 - 495541727962.4
bifunctional acetylxylan esterase/glucomannan deacetylase axec2EWM63_RS21160Not AvailablePositive4955414 - 495647237807.0
transposaseEWM63_RS21165Not AvailableNegative4956594 - 495719623167.6
tonb-dependent receptorEWM63_RS21170Not AvailableNegative4957411 - 496011399617.5

Displaying genes 4331 – 4340 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.