Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-hexose-6-phosphate mutarotaseEWM63_RS17335Not AvailableNegative4069943 - 407073728902.0
n-acetylmuramoyl-l-alanine amidaseEWM63_RS17340Not AvailableNegative4070748 - 407215751063.5
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeEWM63_RS17345Not AvailableNegative4072121 - 407259717042.5
trna epoxyqueuosine(34) reductase quegEWM63_RS17350Not AvailablePositive4072646 - 407373439708.6
cpbp family intramembrane glutamic endopeptidaseEWM63_RS17355Not AvailableNegative4073862 - 407471630102.2
marr family winged helix-turn-helix transcriptional regulatorEWM63_RS17360Not AvailableNegative4074713 - 407521317536.1
aaa family atpaseEWM63_RS17365Not AvailableNegative4075279 - 407601327269.4
response regulator transcription factorEWM63_RS17370Not AvailableNegative4076028 - 407661521517.0
pas domain s-box proteinEWM63_RS17375Not AvailableNegative4076620 - 407861773737.2
trap transporter substrate-binding proteinEWM63_RS17380Not AvailablePositive4078743 - 407973536280.0

Displaying genes 3571 – 3580 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.