Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinEWM63_RS12440Not AvailablePositive2963443 - 296428231159.9
branched-chain amino acid abc transporter permeaseEWM63_RS12445Not AvailablePositive2964278 - 296517431812.5
branched-chain amino acid abc transporter permeaseEWM63_RS12450Not AvailablePositive2965176 - 296623438172.1
abc transporter substrate-binding proteinEWM63_RS12455Not AvailablePositive2966258 - 296755346888.5
abc transporter atp-binding proteinEWM63_RS12460Not AvailablePositive2967550 - 296835029401.6
mmcq/yjbr family dna-binding proteinEWM63_RS12465Not AvailablePositive2968347 - 296870613023.8
phenylacetate--coa ligase family proteinEWM63_RS12470Not AvailablePositive2968703 - 296998045653.4
hypoxanthine-guanine phosphoribosyltransferaseEWM63_RS12475Not AvailablePositive2970104 - 297067621181.4
atp-dependent clp endopeptidase proteolytic subunit clppEWM63_RS12480Not AvailableNegative2970668 - 297127021973.2
sigma-70 family rna polymerase sigma factorEWM63_RS12485Not AvailablePositive2971409 - 297222729785.0

Displaying genes 2581 – 2590 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.