Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein mrecEWM63_RS09005Not AvailableNegative2138999 - 214015640151.1
rod shape-determining proteinEWM63_RS09010Not AvailableNegative2140305 - 214134837000.1
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcEWM63_RS09015Not AvailablePositive2141706 - 214200511020.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataEWM63_RS09020Not AvailablePositive2142030 - 214351452527.3
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbEWM63_RS09025Not AvailablePositive2143517 - 214499553766.1
duf1176 domain-containing proteinEWM63_RS09030Not AvailablePositive2145083 - 214610235808.7
pyridoxamine 5'-phosphate oxidase family proteinEWM63_RS09035Not AvailableNegative2146174 - 214669518888.3
alpha/beta fold hydrolaseEWM63_RS09040Not AvailableNegative2146761 - 214765432515.0
hypothetical proteinEWM63_RS09045Not AvailableNegative2147670 - 214803513270.7
orotate phosphoribosyltransferaseEWM63_RS09050Not AvailableNegative2148138 - 214879423026.5

Displaying genes 1891 – 1900 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.