Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration dna helicase ruvbEWM63_RS08705Not AvailableNegative2073335 - 207438438327.2
holliday junction branch migration protein ruvaEWM63_RS08710Not AvailableNegative2074400 - 207498120292.0
crossover junction endodeoxyribonuclease ruvcEWM63_RS08715Not AvailableNegative2075013 - 207554318266.5
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseEWM63_RS08720Not AvailableNegative2075740 - 207732656435.5
helix-turn-helix domain-containing proteinEWM63_RS08725Not AvailableNegative2077420 - 20776538811.66
trna dihydrouridine synthase dusbEWM63_RS08730Not AvailableNegative2077696 - 207871237709.2
tim-barrel domain-containing proteinEWM63_RS08735Not AvailablePositive2078967 - 208134587307.4
histidine phosphatase family proteinEWM63_RS08740Not AvailableNegative2081462 - 208210324002.2
ybhb/ybcl family raf kinase inhibitor-like proteinEWM63_RS08745Not AvailableNegative2082100 - 208272922618.5
d-aminoacyl-trna deacylaseEWM63_RS08750Not AvailableNegative2082753 - 208320215728.9

Displaying genes 1831 – 1840 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.