Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ncs1 family nucleobase:cation symporter-1EWM63_RS07765Not AvailableNegative1862219 - 186371253864.6
nad-dependent dihydropyrimidine dehydrogenase subunit preaEWM63_RS07770Not AvailableNegative1863878 - 186517947013.3
nad(p)-dependent oxidoreductaseEWM63_RS07775Not AvailableNegative1865179 - 186654649016.8
coa-acylating methylmalonate-semialdehyde dehydrogenaseEWM63_RS07780Not AvailableNegative1866765 - 186826753767.9
alanine dehydrogenaseEWM63_RS07785Not AvailableNegative1868343 - 186945838720.1
aspartate aminotransferase family proteinEWM63_RS07790Not AvailableNegative1869650 - 187096947795.6
plp-dependent aminotransferase family proteinEWM63_RS07795Not AvailablePositive1871120 - 187261053735.9
tetr/acrr family transcriptional regulatorEWM63_RS07800Not AvailablePositive1872621 - 187328024531.5
choice-of-anchor a family proteinEWM63_RS07805Not AvailableNegative1873339 - 187434333648.2
hypothetical proteinEWM63_RS31725Not AvailablePositive1874338 - 18745085968.25

Displaying genes 1641 – 1650 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.