Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenaseEWM63_RS07265Not AvailableNegative1723136 - 172523575790.6
deor/glpr family dna-binding transcription regulatorEWM63_RS07270Not AvailablePositive1725542 - 172640831789.7
rhamnose abc transporter substrate-binding proteinEWM63_RS07275Not AvailablePositive1726405 - 172744535999.4
sugar abc transporter atp-binding proteinEWM63_RS07280Not AvailablePositive1727449 - 172899956005.7
abc transporter permeaseEWM63_RS07285Not AvailablePositive1728996 - 173001835394.4
abc transporter permeaseEWM63_RS07290Not AvailablePositive1730024 - 173109437578.0
fggy-family carbohydrate kinaseEWM63_RS07295Not AvailablePositive1731091 - 173247949193.6
family 43 glycosylhydrolaseEWM63_RS07300Not AvailableNegative1732683 - 173374439030.9
tonb-dependent receptorEWM63_RS07305Not AvailableNegative1733783 - 1737004115812.0
translational gtpase typaEWM63_RS07310Not AvailableNegative1737282 - 173911467601.1

Displaying genes 1541 – 1550 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.