Pseudoduganella lutea strain DSM 17473

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella lutea strain DSM 17473 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number NZ_CP035913.1, facilitating its identification and classification within microbial databases. As a member of the microbial community, Pseudoduganella lutea strain DSM 17473 plays a significant role in its ecological niche. While specific ecological interactions or metabolic pathways have not been detailed, the presence of unique microbial strains like Pseudoduganella lutea can contribute to the diversity and functionality of microbial ecosystems. Such organisms may engage in various biogeochemical cycles, influencing nutrient availability and soil health. The study of strains like Pseudoduganella lutea is vital for understanding microbial biodiversity and its implications for environmental processes. Their single replicon genome may also reflect evolutionary adaptations to specific niches, thus underscoring the importance of genomic studies in microbiology for ecological and evolutionary insights.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella lutea
Strainstrain DSM 17473

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella lutea strain DSM 17473 chromosome.

Gene Summary

Adenine Count

1319281 bp

Thymine Count

1326728 bp

Guanine Count

2426209 bp

Cytosine Count

2432631 bp

Genome Length

7504949 bp

Protein-coding Genes

6226 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iclr family transcriptional regulator c-terminal domain-containing proteinEWM63_RS00275Not AvailableNegative58910 - 5967727976.3
protocatechuate 3,4-dioxygenase subunit betaEWM63_RS00280Not AvailablePositive59836 - 6053126172.2
protocatechuate 3,4-dioxygenaseEWM63_RS00285Not AvailablePositive60542 - 6105718658.7
lyase family proteinEWM63_RS00290Not AvailablePositive61077 - 6246548781.7
alpha/beta fold hydrolaseEWM63_RS00295Not AvailablePositive62462 - 6370644742.3
abc transporter substrate-binding proteinEWM63_RS00300Not AvailableNegative63830 - 6500841142.8
pdr/vanb family oxidoreductaseEWM63_RS00305Not AvailableNegative65038 - 6599434087.5
aromatic ring-hydroxylating oxygenase subunit alphaEWM63_RS00310Not AvailableNegative65991 - 6707339579.1
marr family winged helix-turn-helix transcriptional regulatorEWM63_RS00315Not AvailablePositive67199 - 6770218498.2
abc transporter atp-binding proteinEWM63_RS00320Not AvailableNegative67952 - 6865325737.5

Displaying genes 131 – 140 of 6392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.