Escherichia coli strain U14A

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain U14A is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic respiration, allowing it to thrive in both oxygen-rich and oxygen-poor environments. This strain is motile, possessing flagella, and typically arranges itself in pairs or as single cells. Its optimal growth temperature is 37°C, placing it within the mesophilic range, which is ideal for many host organisms. E. coli U14A has a complex genetic architecture, featuring six replicons and two membranes. It is primarily host-associated, indicating a reliance on various organisms for its ecological niche. This strain has a wide range of potential hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and many others spanning multiple classes of the animal kingdom, as well as some plants like Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). In terms of health impacts, E. coli U14A is associated with a variety of serious conditions, including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. Its pathogenicity in humans underscores its role as a significant public health concern, leading to various infections and complications such as hemolytic uremic syndrome (HUS) and septicemia. The ecological insight from E. coli strain U14A's diverse host range suggests its adaptability and potential role in both environmental and clinical microbiomes. This adaptability may contribute to its persistence in various habitats, further complicating efforts to manage infections caused by this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain U14A

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain U14A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain U14A chromosome, complete genome.

Gene Summary

Adenine Count

1247890 bp

Thymine Count

1244457 bp

Guanine Count

1284651 bp

Cytosine Count

1284274 bp

Genome Length

5061272 bp

Protein-coding Genes

4595 genes

Non-Coding Genes

400 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan dd-transpeptidase mrdaU14A_RS03195Not AvailableNegative675236 - 67713770860.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhU14A_RS03200Not AvailableNegative677168 - 67763517342.1
ribosome silencing factorU14A_RS03205Not AvailableNegative677639 - 67795611582.9
adenosylcobalamin/alpha-ribazole phosphataseU14A_RS03210Not AvailableNegative678216 - 67882723409.8
nicotinate-nucleotide adenylyltransferaseU14A_RS03215Not AvailableNegative678851 - 67949224561.4
dna polymerase iii subunit deltaU14A_RS03220Not AvailableNegative679494 - 68052538732.0
lps assembly lipoprotein lpteU14A_RS03225Not AvailableNegative680525 - 68110621357.8
leucine--trna ligaseU14A_RS03230Not AvailableNegative681121 - 68370397240.0
zinc ribbon-containing proteinU14A_RS03235Not AvailablePositive683938 - 68442018798.2
duf2686 family proteinU14A_RS27080Not AvailableNegative684490 - 68482512546.5

Displaying genes 1001 – 1010 of 5196 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total