Pediococcus acidilactici strain SRCM103387

Gram-positiveCocciNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Pediococcus

Description

Pediococcus acidilactici strain SRCM103387 is a Gram-positive, non-motile coccus that thrives in anaerobic environments. This strain is classified as a chemoheterotroph, utilizing organic compounds as its energy source. It falls within the mesophilic temperature range, with an optimal growth temperature of 30°C. This microorganism has been identified in multiple habitats and is known to possess two replicons. It exhibits a diverse host range, including Homo sapiens (humans), Gallus gallus (chickens), Hordeum vulgare (barley), Oryctolagus cuniculus (rabbits), Raphanus sativus (radishes), and Salvelinus alpinus (arctic char). Pediococcus acidilactici strain SRCM103387 is associated with several health concerns in humans, such as endocarditis, sepsis, skin infections, and opportunistic infections. Notably, it can contribute to serious conditions like Fournier's gangrene and internal organ infections or abscesses. The nonsporulating nature of this strain indicates that it does not form spores, which is a key characteristic that may influence its survival and pathogenic potential in various environments. The presence of two genomic replicons may also provide insights into its genetic diversity and adaptability. In ecological terms, the versatility of Pediococcus acidilactici strain SRCM103387 in colonizing various hosts highlights its potential role in both health and disease in the microbiome, illustrating the complex interactions that exist between microorganisms and their hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPediococcus
SpeciesPediococcus acidilactici
Strainstrain SRCM103387

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Pediococcus acidilactici strain SRCM103387
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Hordeum vulgare
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pediococcus acidilactici strain SRCM103387


Gene Summary

Adenine Count

578412 bp

Thymine Count

576649 bp

Guanine Count

423459 bp

Cytosine Count

422559 bp

Genome Length

2001079 bp

Protein-coding Genes

1802 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uracil 4-sulfurtransferase thiiEQJ95_RS06910Not AvailableNegative1382741 - 138395845170.2
cysteine desulfurase family proteinEQJ95_RS06915Not AvailableNegative1383971 - 138512542379.4
septation ring formation regulator ezraEQJ95_RS06920Not AvailableNegative1385361 - 138707065608.1
gaf domain-containing proteinEQJ95_RS06925Not AvailablePositive1387234 - 138771917470.0
30s ribosomal protein s4EQJ95_RS06930Not AvailablePositive1387902 - 138851023255.1
replication-associated recombination protein aEQJ95_RS06935Not AvailablePositive1388568 - 138984546631.0
Ncrna_class:otherNot AvailableNot AvailablePositive1389885 - 1390064Not Available
universal stress proteinEQJ95_RS06950Not AvailablePositive1390457 - 139091216702.9
dna-3-methyladenine glycosylase iEQJ95_RS06960Not AvailableNegative1391212 - 139177521973.6
d-alanine--d-alanine ligaseEQJ95_RS06965Not AvailableNegative1391823 - 139287838592.6

Displaying genes 1391 – 1400 of 2025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Fournier ??s gangreneCausesPMC12859440
Opportunistic infectionsCausesPMC12859440
SepsisCausesPMC12859440
Internal organ infection/abscessesCausesPMC12859440
EndocarditisCausesPMC12859440
Skin infectionsCausesPMC12859440

Displaying health effects 1 – 6 of 6 in total