Pediococcus acidilactici strain SRCM103387

Gram-positiveCocciNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Pediococcus

Description

Pediococcus acidilactici strain SRCM103387 is a Gram-positive, non-motile coccus that thrives in anaerobic environments. This strain is classified as a chemoheterotroph, utilizing organic compounds as its energy source. It falls within the mesophilic temperature range, with an optimal growth temperature of 30°C. This microorganism has been identified in multiple habitats and is known to possess two replicons. It exhibits a diverse host range, including Homo sapiens (humans), Gallus gallus (chickens), Hordeum vulgare (barley), Oryctolagus cuniculus (rabbits), Raphanus sativus (radishes), and Salvelinus alpinus (arctic char). Pediococcus acidilactici strain SRCM103387 is associated with several health concerns in humans, such as endocarditis, sepsis, skin infections, and opportunistic infections. Notably, it can contribute to serious conditions like Fournier's gangrene and internal organ infections or abscesses. The nonsporulating nature of this strain indicates that it does not form spores, which is a key characteristic that may influence its survival and pathogenic potential in various environments. The presence of two genomic replicons may also provide insights into its genetic diversity and adaptability. In ecological terms, the versatility of Pediococcus acidilactici strain SRCM103387 in colonizing various hosts highlights its potential role in both health and disease in the microbiome, illustrating the complex interactions that exist between microorganisms and their hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPediococcus
SpeciesPediococcus acidilactici
Strainstrain SRCM103387

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Pediococcus acidilactici strain SRCM103387
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Hordeum vulgare
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pediococcus acidilactici strain SRCM103387


Gene Summary

Adenine Count

578412 bp

Thymine Count

576649 bp

Guanine Count

423459 bp

Cytosine Count

422559 bp

Genome Length

2001079 bp

Protein-coding Genes

1802 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive1006952 - 1007327Not Available
class i sam-dependent rna methyltransferaseEQJ95_RS05100Not AvailablePositive1007417 - 100854742664.0
nad(p)/fad-dependent oxidoreductaseEQJ95_RS05105Not AvailablePositive1008557 - 100966340719.1
ebsa family proteinEQJ95_RS05110Not AvailablePositive1009663 - 101004615157.8
formate--tetrahydrofolate ligaseEQJ95_RS05115Not AvailablePositive1010053 - 101172059647.1
signal peptidase iiEQJ95_RS05120Not AvailablePositive1011733 - 101218516968.3
rlua family pseudouridine synthaseEQJ95_RS05125Not AvailablePositive1012195 - 101310333694.8
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrEQJ95_RS05130Not AvailablePositive1013184 - 101371720038.4
carbamoyl phosphate synthase small subunitEQJ95_RS05135Not AvailablePositive1013746 - 101483139924.7
atp-grasp domain-containing proteinEQJ95_RS05140Not AvailablePositive1014833 - 101729291374.4

Displaying genes 1031 – 1040 of 2025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Fournier ??s gangreneCausesPMC12859440
Opportunistic infectionsCausesPMC12859440
SepsisCausesPMC12859440
Internal organ infection/abscessesCausesPMC12859440
EndocarditisCausesPMC12859440
Skin infectionsCausesPMC12859440

Displaying health effects 1 – 6 of 6 in total