Pediococcus acidilactici strain SRCM103387

Gram-positiveCocciNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Pediococcus

Description

Pediococcus acidilactici strain SRCM103387 is a Gram-positive, non-motile coccus that thrives in anaerobic environments. This strain is classified as a chemoheterotroph, utilizing organic compounds as its energy source. It falls within the mesophilic temperature range, with an optimal growth temperature of 30°C. This microorganism has been identified in multiple habitats and is known to possess two replicons. It exhibits a diverse host range, including Homo sapiens (humans), Gallus gallus (chickens), Hordeum vulgare (barley), Oryctolagus cuniculus (rabbits), Raphanus sativus (radishes), and Salvelinus alpinus (arctic char). Pediococcus acidilactici strain SRCM103387 is associated with several health concerns in humans, such as endocarditis, sepsis, skin infections, and opportunistic infections. Notably, it can contribute to serious conditions like Fournier's gangrene and internal organ infections or abscesses. The nonsporulating nature of this strain indicates that it does not form spores, which is a key characteristic that may influence its survival and pathogenic potential in various environments. The presence of two genomic replicons may also provide insights into its genetic diversity and adaptability. In ecological terms, the versatility of Pediococcus acidilactici strain SRCM103387 in colonizing various hosts highlights its potential role in both health and disease in the microbiome, illustrating the complex interactions that exist between microorganisms and their hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPediococcus
SpeciesPediococcus acidilactici
Strainstrain SRCM103387

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Pediococcus acidilactici strain SRCM103387
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Hordeum vulgare
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pediococcus acidilactici strain SRCM103387


Gene Summary

Adenine Count

578412 bp

Thymine Count

576649 bp

Guanine Count

423459 bp

Cytosine Count

422559 bp

Genome Length

2001079 bp

Protein-coding Genes

1802 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine phosphatase family proteinEQJ95_RS09045Not AvailablePositive1808164 - 180876622549.6
nad(p)h-binding proteinEQJ95_RS09050Not AvailableNegative1808877 - 180973130314.7
rrf2 family transcriptional regulatorEQJ95_RS09055Not AvailablePositive1809850 - 181032617332.8
b3/4 domain-containing proteinEQJ95_RS09060Not AvailableNegative1810435 - 181112425726.6
lysr family transcriptional regulatorEQJ95_RS09065Not AvailableNegative1811328 - 181221233903.2
dmt family transporterEQJ95_RS09070Not AvailablePositive1812368 - 181332134348.1
2,3-diphosphoglycerate-dependent phosphoglycerate mutaseEQJ95_RS09075Not AvailableNegative1813389 - 181407826030.7
phosphopyruvate hydrataseEQJ95_RS09080Not AvailableNegative1814173 - 181545946803.4
hypothetical proteinEQJ95_RS09085Not AvailableNegative1815670 - 181656033018.3
sam-dependent methyltransferaseEQJ95_RS09090Not AvailablePositive1816715 - 181789044812.2

Displaying genes 1811 – 1820 of 2025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Fournier ??s gangreneCausesPMC12859440
Opportunistic infectionsCausesPMC12859440
SepsisCausesPMC12859440
Internal organ infection/abscessesCausesPMC12859440
EndocarditisCausesPMC12859440
Skin infectionsCausesPMC12859440

Displaying health effects 1 – 6 of 6 in total