Geovibrio thiophilus strain DSM 11263

anaerobic

Kingdom

Pseudomonadati

Phylum

Deferribacterota

Class

Deferribacteres

Order

Deferribacterales

Family

Geovibrionaceae

Genus

Geovibrio

Description

Geovibrio thiophilus strain DSM 11263 is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This characteristic is significant as it allows the organism to occupy ecological niches where aerobic organisms cannot survive, such as deep-sea sediments or anoxic layers of aquatic systems. The strain has been cataloged with one replicon, indicating a singular circular DNA structure typical of many bacterial genomes. This trait can influence the organism's genetic stability and replication dynamics, potentially affecting its adaptability and evolutionary strategies. The accession number for this strain is NZ_CP035108.1, which serves as a unique identifier in genomic databases, facilitating access to its genetic information and comparative studies with other microorganisms. Understanding the genomic features associated with Geovibrio thiophilus could provide insights into its metabolic pathways and ecological roles. In summary, Geovibrio thiophilus strain DSM 11263 represents an anaerobic bacterium with a single replicon, a trait that may influence its adaptability in oxygen-limited environments. Its ecological significance lies in its potential role in biogeochemical cycles, particularly in sulfur metabolism, as many members of the Geovibrio genus are known for their involvement in sulfur reduction processes.

Taxonomy

KingdomPseudomonadati
PhylumDeferribacterota
ClassDeferribacteres
OrderDeferribacterales
FamilyGeovibrionaceae
GenusGeovibrio
SpeciesGeovibrio thiophilus
Strainstrain DSM 11263

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geovibrio thiophilus strain DSM 11263 chromosome, complete genome.

Gene Summary

Adenine Count

773779 bp

Thymine Count

780554 bp

Guanine Count

720890 bp

Cytosine Count

722329 bp

Genome Length

2997552 bp

Protein-coding Genes

2718 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ftsk/spoiiie family dna translocaseEP073_RS02410Not AvailablePositive493891 - 49613782223.6
dihydroorotate dehydrogenase-like proteinEP073_RS02415Not AvailablePositive496643 - 49762335944.2
trk system potassium transporter trkaEP073_RS02420Not AvailablePositive497633 - 49897348903.7
trkh family potassium uptake proteinEP073_RS02425Not AvailablePositive498976 - 50042752790.2
carbamoyltransferase hypfEP073_RS02430Not AvailablePositive500424 - 50265281508.4
apolipoprotein n-acyltransferaseEP073_RS02435Not AvailablePositive502847 - 50432254892.8
twin-arginine translocase tata/tate family subunitEP073_RS02440Not AvailablePositive504372 - 5045787264.88
energy-coupling factor transporter transmembrane component t family proteinEP073_RS02445Not AvailablePositive504612 - 50529525233.2
trna pseudouridine(38-40) synthase truaEP073_RS02450Not AvailablePositive505288 - 50602227996.9
hypothetical proteinEP073_RS02455Not AvailableNegative506425 - 50699120972.2

Displaying genes 481 – 490 of 2771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.