Ornithobacterium rhinotracheale strain FARPER-174b

microaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Ornithobacterium

Description

Ornithobacterium rhinotracheale strain FARPER-174b is a microaerophilic bacterium primarily associated with birds, specifically within the class Aves. This strain is noted for its role in respiratory diseases affecting avian species, which can pose significant health challenges in poultry. The genetic makeup of FARPER-174b is characterized by a single replicon, indicating a streamlined genomic structure that is often seen in bacteria adapted to specific ecological niches. The strain is cataloged under the accession number NZ_CP035107.1, providing a reference for further genomic studies and comparisons within the broader context of Ornithobacterium species. The microaerophilic nature of FARPER-174b suggests it thrives in environments with reduced oxygen levels, which is typical for respiratory tracts of birds where oxygen concentration can be lower than in the atmosphere. This adaptation likely contributes to its pathogenicity, as it can exploit the respiratory systems of avian hosts to cause disease. Understanding the characteristics of Ornithobacterium rhinotracheale strain FARPER-174b can provide insights into its ecological role within avian populations and its potential impact on poultry health. The respiratory diseases it induces may have significant implications for poultry management and biosecurity, highlighting the importance of monitoring and controlling such pathogens in avian environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusOrnithobacterium
SpeciesOrnithobacterium rhinotracheale
Strainstrain FARPER-174b

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ornithobacterium rhinotracheale strain FARPER-174b chromosome,

Gene Summary

Adenine Count

691189 bp

Thymine Count

699005 bp

Guanine Count

431068 bp

Cytosine Count

432328 bp

Genome Length

2253590 bp

Protein-coding Genes

2117 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mannose-1-phosphate guanylyltransferaseEQP59_RS00015Not AvailableNegative1983 - 307441304.3
sprt-like domain-containing proteinEQP59_RS00020Not AvailableNegative3078 - 367423172.4
abc transporter atp-binding proteinEQP59_RS00025Not AvailableNegative3712 - 448229237.4
mlae family abc transporter permeaseEQP59_RS00030Not AvailableNegative4479 - 523727904.0
duf4488 domain-containing proteinEQP59_RS00035Not AvailableNegative5319 - 580418761.7
duf4488 domain-containing proteinEQP59_RS00040Not AvailableNegative5813 - 625316838.4
replication-associated recombination protein aEQP59_RS00045Not AvailableNegative6360 - 764047631.0
ribose 5-phosphate isomerase bEQP59_RS00050Not AvailablePositive8238 - 867215758.7
methyltransferaseEQP59_RS00055Not AvailablePositive8759 - 910612854.4
hypothetical proteinEQP59_RS00060Not AvailablePositive9091 - 948315749.2

Displaying genes 41 – 50 of 2193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Respiratory diseaseCausesPMC5704556

Displaying health effects 1 – 1 of 1 in total