Pseudomonas viciae strain 11K1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas viciae strain 11K1 is characterized by having a single replicon, which is significant in understanding its genetic stability and replication dynamics. This strain is cataloged under the accession number NZ_CP035088.1, facilitating its identification and further study within genomic databases. The single replicon structure may suggest a streamlined genomic organization, which can be advantageous for efficient resource utilization and adaptability in various environments. As a member of the Pseudomonas genus, known for its metabolic diversity and ecological versatility, strain 11K1 potentially plays a role in nitrogen fixation and plant growth promotion, particularly in association with leguminous plants, which could enhance agricultural practices. In summary, Pseudomonas viciae strain 11K1, with its single replicon (NZ_CP035088.1), exemplifies a microbial entity that may contribute positively to soil health and crop productivity through its interactions in the rhizosphere. Such traits underscore the ecological importance of this strain in sustainable agriculture and its potential applications in biocontrol and biofertilization.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas viciae
Strainstrain 11K1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas viciae strain 11K1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas viciae strain 11K1 chromosome, complete genome.

Gene Summary

Adenine Count

1327527 bp

Thymine Count

1321433 bp

Guanine Count

2012679 bp

Cytosine Count

2021193 bp

Genome Length

6682832 bp

Protein-coding Genes

5705 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlmlEPZ47_RS09200Not AvailablePositive2007070 - 200934085184.9
ggdef domain-containing proteinEPZ47_RS09205Not AvailablePositive2009485 - 201186988009.6
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseEPZ47_RS09210Not AvailableNegative2011957 - 201342352583.4
yggl family proteinEPZ47_RS09215Not AvailablePositive2013658 - 201400212825.2
benzoate/h(+) symporter bene family transporterEPZ47_RS09220Not AvailableNegative2014164 - 201535440932.7
gntr family transcriptional regulatorEPZ47_RS09225Not AvailablePositive2015597 - 201636128120.5
guanine deaminaseEPZ47_RS09230Not AvailableNegative2016482 - 201778647967.2
xanthine dehydrogenase accessory protein xdhcEPZ47_RS09235Not AvailableNegative2017808 - 201865030595.0
xanthine dehydrogenase molybdopterin binding subunitEPZ47_RS09240Not AvailableNegative2018768 - 202116787475.2
xanthine dehydrogenase small subunitEPZ47_RS09245Not AvailableNegative2021160 - 202261453247.6

Displaying genes 1851 – 1860 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.