Pseudomonas viciae strain 11K1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas viciae strain 11K1 is characterized by having a single replicon, which is significant in understanding its genetic stability and replication dynamics. This strain is cataloged under the accession number NZ_CP035088.1, facilitating its identification and further study within genomic databases. The single replicon structure may suggest a streamlined genomic organization, which can be advantageous for efficient resource utilization and adaptability in various environments. As a member of the Pseudomonas genus, known for its metabolic diversity and ecological versatility, strain 11K1 potentially plays a role in nitrogen fixation and plant growth promotion, particularly in association with leguminous plants, which could enhance agricultural practices. In summary, Pseudomonas viciae strain 11K1, with its single replicon (NZ_CP035088.1), exemplifies a microbial entity that may contribute positively to soil health and crop productivity through its interactions in the rhizosphere. Such traits underscore the ecological importance of this strain in sustainable agriculture and its potential applications in biocontrol and biofertilization.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas viciae
Strainstrain 11K1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas viciae strain 11K1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas viciae strain 11K1 chromosome, complete genome.

Gene Summary

Adenine Count

1327527 bp

Thymine Count

1321433 bp

Guanine Count

2012679 bp

Cytosine Count

2021193 bp

Genome Length

6682832 bp

Protein-coding Genes

5705 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseEPZ47_RS05880Not AvailablePositive1309857 - 131096939151.6
s-formylglutathione hydrolaseEPZ47_RS05885Not AvailablePositive1310978 - 131182331165.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseEPZ47_RS05890Not AvailablePositive1311867 - 131234016863.4
trna pseudouridine(13) synthase trudEPZ47_RS05895Not AvailablePositive1312337 - 131339538517.9
5'/3'-nucleotidase sureEPZ47_RS05900Not AvailablePositive1313383 - 131413226647.7
protein-l-isoaspartate(d-aspartate) o-methyltransferaseEPZ47_RS05905Not AvailablePositive1314174 - 131480923550.7
peptidoglycan dd-metalloendopeptidase family proteinEPZ47_RS05910Not AvailablePositive1315036 - 131588429776.6
rna polymerase sigma factor rposEPZ47_RS05915Not AvailablePositive1315991 - 131699838192.6
ferredoxin fdxaEPZ47_RS05920Not AvailableNegative1317492 - 131781512008.0
pp_01187EPZ47_RS06180Not AvailablePositive1357434 - 1358180Not Available

Displaying genes 1251 – 1260 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.