Hydrogenovibrio thermophilus strain JR-2

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Hydrogenovibrio

Description

Hydrogenovibrio thermophilus strain JR-2 is a Gram-negative, rod-shaped bacterium classified as a microaerophile, indicating that it requires low levels of oxygen for growth. This strain thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range, which encompasses organisms that grow best at moderate temperatures. The genomic structure of Hydrogenovibrio thermophilus strain JR-2 is characterized by the presence of a single replicon, which is significant for its genetic stability and replication processes. Additionally, this strain is non-spore-forming, indicating that it does not produce spores as a means of survival under unfavorable conditions. The accession number for this strain is NZ_CP035033.1, which provides a reference for researchers seeking genomic data or further insights into its genetic makeup. From a biological and ecological perspective, the traits of Hydrogenovibrio thermophilus strain JR-2 suggest that it may play a role in specific ecological niches where microaerophilic conditions prevail, such as in certain thermal environments. Its optimal growth temperature of 37°C aligns with many biological systems, potentially allowing it to interact with other microorganisms within similar habitats. Understanding these traits enhances our knowledge of the ecological roles that such bacteria may occupy in their natural environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusHydrogenovibrio
SpeciesHydrogenovibrio thermophilus
Strainstrain JR-2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenovibrio thermophilus strain JR-2 chromosome, complete

Gene Summary

Adenine Count

649134 bp

Thymine Count

644808 bp

Guanine Count

661833 bp

Cytosine Count

657119 bp

Genome Length

2612894 bp

Protein-coding Genes

2403 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tryptophan synthase subunit alphaEPV75_RS04575Not AvailablePositive989134 - 98995229401.4
acetyl-coa carboxylase, carboxyltransferase subunit betaEPV75_RS04580Not AvailablePositive990019 - 99087331338.3
bifunctional tetrahydrofolate synthase/dihydrofolate synthaseEPV75_RS04585Not AvailablePositive990889 - 99216046007.2
spor domain-containing proteinEPV75_RS04590Not AvailablePositive992153 - 99277323101.2
amidophosphoribosyltransferaseEPV75_RS04595Not AvailablePositive992821 - 99434456230.6
o-succinylhomoserine sulfhydrylaseEPV75_RS04600Not AvailablePositive994337 - 99551842862.0
ribosome assembly rna-binding protein yhbyEPV75_RS04605Not AvailableNegative995551 - 99585611363.8
hypothetical proteinEPV75_RS12225Not AvailablePositive995879 - 9960345927.11
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeEPV75_RS04610Not AvailablePositive996021 - 99664123445.2
atp-dependent zinc metalloprotease ftshEPV75_RS04615Not AvailablePositive996807 - 99875670705.5

Displaying genes 921 – 930 of 2459 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.