Hydrogenovibrio thermophilus strain JR-2

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Hydrogenovibrio

Description

Hydrogenovibrio thermophilus strain JR-2 is a Gram-negative, rod-shaped bacterium classified as a microaerophile, indicating that it requires low levels of oxygen for growth. This strain thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range, which encompasses organisms that grow best at moderate temperatures. The genomic structure of Hydrogenovibrio thermophilus strain JR-2 is characterized by the presence of a single replicon, which is significant for its genetic stability and replication processes. Additionally, this strain is non-spore-forming, indicating that it does not produce spores as a means of survival under unfavorable conditions. The accession number for this strain is NZ_CP035033.1, which provides a reference for researchers seeking genomic data or further insights into its genetic makeup. From a biological and ecological perspective, the traits of Hydrogenovibrio thermophilus strain JR-2 suggest that it may play a role in specific ecological niches where microaerophilic conditions prevail, such as in certain thermal environments. Its optimal growth temperature of 37°C aligns with many biological systems, potentially allowing it to interact with other microorganisms within similar habitats. Understanding these traits enhances our knowledge of the ecological roles that such bacteria may occupy in their natural environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusHydrogenovibrio
SpeciesHydrogenovibrio thermophilus
Strainstrain JR-2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenovibrio thermophilus strain JR-2 chromosome, complete

Gene Summary

Adenine Count

649134 bp

Thymine Count

644808 bp

Guanine Count

661833 bp

Cytosine Count

657119 bp

Genome Length

2612894 bp

Protein-coding Genes

2403 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system major pseudopilin gspgEPV75_RS02540Not AvailablePositive551262 - 55170816604.9
prepilin-type n-terminal cleavage/methylation domain-containing proteinEPV75_RS02545Not AvailablePositive551714 - 55228621765.3
type ii secretion system minor pseudopilin gspiEPV75_RS02550Not AvailablePositive552276 - 55265914122.0
type ii secretion system minor pseudopilin gspjEPV75_RS02555Not AvailablePositive552661 - 55327822952.4
type ii secretion system minor pseudopilin gspkEPV75_RS02560Not AvailablePositive553275 - 55424636151.3
type ii secretion system protein gsplEPV75_RS02565Not AvailablePositive554239 - 55534242020.2
type ii secretion system protein gspmEPV75_RS02570Not AvailablePositive555326 - 55586220423.6
type ii secretion system protein nEPV75_RS02575Not AvailablePositive555859 - 55662328135.0
s8 family serine peptidaseEPV75_RS02580Not AvailablePositive556623 - 55848865958.4
hypothetical proteinEPV75_RS02585Not AvailablePositive558528 - 55905819906.8

Displaying genes 511 – 520 of 2459 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.