Limnobaculum zhutongyuii strain CF-458

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Budviciaceae

Genus

Limnobaculum

Description

Limnobaculum zhutongyuii strain CF-458 is characterized by having a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and functionality in various environments. The strain is cataloged under the accession number NZ_CP034752.1, providing a reference for researchers seeking genomic information or conducting further studies related to this organism. As a member of the Limnobaculum genus, this strain is likely to inhabit freshwater ecosystems, where it may play a role in nutrient cycling and the maintenance of microbial diversity. The single replicon feature suggests a potential for efficient replication and resource utilization, which could be advantageous in fluctuating environmental conditions. In summary, Limnobaculum zhutongyuii strain CF-458, with its single replicon and specific genomic accession, exemplifies a bacterial organism that may contribute significantly to its ecological niche, particularly in freshwater environments. Understanding its biology can provide insights into the ecological roles of such microorganisms in sustaining aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBudviciaceae
GenusLimnobaculum
SpeciesLimnobaculum zhutongyuii
Strainstrain CF-458

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnobaculum zhutongyuii strain CF-458


Gene Summary

Adenine Count

1265544 bp

Thymine Count

1250530 bp

Guanine Count

1037838 bp

Cytosine Count

1078031 bp

Genome Length

4631943 bp

Protein-coding Genes

3776 genes

Non-Coding Genes

440 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6484 domain-containing proteinEKN56_RS11850Not AvailableNegative2639108 - 263957216891.7
glycine cleavage system protein hEKN56_RS11855Not AvailableNegative2639565 - 263995714982.7
type vi secretion system vgr family proteinEKN56_RS11860Not AvailableNegative2639947 - 264219982550.0
type vi secretion system baseplate subunit tssfEKN56_RS11865Not AvailableNegative2642284 - 264403566759.1
hcp family type vi secretion system effectorEKN56_RS11870Not AvailableNegative2644113 - 264462818946.4
type vi secretion system contractile sheath small subunitEKN56_RS11875Not AvailablePositive2645267 - 264577918864.6
type vi secretion system contractile sheath large subunitEKN56_RS11880Not AvailablePositive2645880 - 264736755865.1
type vi secretion system baseplate subunit tsseEKN56_RS11885Not AvailablePositive2647371 - 264778715813.9
type vi secretion system baseplate subunit tssfEKN56_RS11890Not AvailablePositive2647821 - 264954566209.0
type vi secretion system baseplate subunit tssgEKN56_RS11895Not AvailablePositive2649524 - 265050137513.3

Displaying genes 2571 – 2580 of 4216 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.