Xanthomonas vasicola strain NCPPB 902

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vasicola strain NCPPB 902 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, indicating a streamlined genomic organization. The genomic information of this strain can be accessed under the accession number NZ_CP034657.1, which facilitates further research and study of its genetic makeup and functional attributes. As a member of the genus Xanthomonas, X. vasicola is known for its role in plant pathology, particularly in causing diseases in various crops. The motility conferred by its flagella may play a significant role in its ability to colonize host plants and spread within agricultural environments. Understanding the genetic and phenotypic traits of X. vasicola strain NCPPB 902 can provide insights into its pathogenic mechanisms and ecological interactions. The study of this strain is essential for developing effective management strategies against diseases caused by Xanthomonas species, which can lead to significant agricultural losses. By exploring the traits and genetic information of X. vasicola, researchers can enhance their understanding of its ecology and potential impact on crop health, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vasicola
Strainstrain NCPPB 902

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vasicola strain NCPPB 902
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vasicola strain NCPPB 902 chromosome, complete genome.

Gene Summary

Adenine Count

903155 bp

Thymine Count

899836 bp

Guanine Count

1554844 bp

Cytosine Count

1558184 bp

Genome Length

4916019 bp

Protein-coding Genes

4156 genes

Non-Coding Genes

208 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinNX08_RS01770Not AvailablePositive384279 - 38550346078.1
type ii toxin-antitoxin system vapc family toxinNX08_RS01775Not AvailableNegative385591 - 38598613715.5
abrb/maze/spovt family dna-binding domain-containing proteinNX08_RS01780Not AvailableNegative385983 - 3862348767.69
4-hydroxybenzoate octaprenyltransferaseNX08_RS01790Not AvailableNegative386739 - 38764433301.1
Trna-argNot AvailableNot AvailablePositive388075 - 388151Not Available
type iii secretion system effector xopaeNX08_RS01800Not AvailableNegative388562 - 39021761096.9
hrpf/nolx family t3ss translocon proteinNX08_RS01810Not AvailableNegative391095 - 39375894163.6
hpa3 family type iii secretion system proteinNX08_RS01815Not AvailablePositive394542 - 39498815513.0
type iii secretion system effector xopf1NX08_RS01820Not AvailablePositive394985 - 39700370843.8
cest family type iii secretion system chaperoneNX08_RS01825Not AvailableNegative397710 - 39818017675.2

Displaying genes 421 – 430 of 4364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.