Xanthomonas vasicola strain NCPPB 902

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vasicola strain NCPPB 902 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain is notable for having a single replicon, indicating a streamlined genomic organization. The genomic information of this strain can be accessed under the accession number NZ_CP034657.1, which facilitates further research and study of its genetic makeup and functional attributes. As a member of the genus Xanthomonas, X. vasicola is known for its role in plant pathology, particularly in causing diseases in various crops. The motility conferred by its flagella may play a significant role in its ability to colonize host plants and spread within agricultural environments. Understanding the genetic and phenotypic traits of X. vasicola strain NCPPB 902 can provide insights into its pathogenic mechanisms and ecological interactions. The study of this strain is essential for developing effective management strategies against diseases caused by Xanthomonas species, which can lead to significant agricultural losses. By exploring the traits and genetic information of X. vasicola, researchers can enhance their understanding of its ecology and potential impact on crop health, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vasicola
Strainstrain NCPPB 902

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vasicola strain NCPPB 902
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vasicola strain NCPPB 902 chromosome, complete genome.

Gene Summary

Adenine Count

903155 bp

Thymine Count

899836 bp

Guanine Count

1554844 bp

Cytosine Count

1558184 bp

Genome Length

4916019 bp

Protein-coding Genes

4156 genes

Non-Coding Genes

208 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent isocitrate dehydrogenaseNX08_RS19905Not AvailableNegative4301447 - 430367880388.7
swim zinc finger domain-containing proteinNX08_RS19910Not AvailablePositive4303882 - 430558263677.5
crispr-associated endonuclease cas3''NX08_RS19915Not AvailablePositive4305746 - 430804085285.2
type i-c crispr-associated protein cas5cNX08_RS19920Not AvailablePositive4308526 - 430920024955.0
type i-c crispr-associated protein cas8c/csd1NX08_RS19925Not AvailablePositive4309197 - 431104166717.8
type i-c crispr-associated protein cas7/csd2NX08_RS19930Not AvailablePositive4311038 - 431191632958.3
crispr-associated protein cas4NX08_RS19935Not AvailablePositive4311936 - 431256823839.5
type i-c crispr-associated endonuclease cas1cNX08_RS19940Not AvailablePositive4312571 - 431360539124.7
crispr-associated endonuclease cas2NX08_RS19945Not AvailablePositive4313621 - 431391110973.3
hypothetical proteinNX08_RS19950Not AvailableNegative4317617 - 431817117743.6

Displaying genes 3831 – 3840 of 4364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.