Xanthomonas vasicola pv. musacearum NCPPB 4379

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vasicola pv. musacearum NCPPB 4379 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This bacterium is known for its role as a plant pathogen, specifically affecting banana and plantain crops. The genomic structure of Xanthomonas vasicola pv. musacearum NCPPB 4379 is notable for having a single replicon, which is a characteristic feature of many bacteria that influences their replication and genetic stability. The accession number for this strain is NZ_CP034655.1, which allows for its identification and retrieval of genomic information from databases. Biologically, the presence of flagella suggests that Xanthomonas vasicola pv. musacearum NCPPB 4379 can actively move towards nutrient sources and away from harmful conditions, enhancing its survival and pathogenicity. The rod shape may also be advantageous in colonizing plant surfaces and penetrating host tissues. Understanding these traits provides insight into the ecological interactions of this bacterium within agricultural systems, where it can significantly impact crop health and yield.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vasicola
Strainpv. musacearum NCPPB 4379

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vasicola pv. musacearum NCPPB 4379
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vasicola pv. musacearum NCPPB 4379 chromosome,

Gene Summary

Adenine Count

871848 bp

Thymine Count

877307 bp

Guanine Count

1518441 bp

Cytosine Count

1520546 bp

Genome Length

4788142 bp

Protein-coding Genes

4044 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hisfKWO_RS09550Not AvailablePositive2029120 - 202989628172.8
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieKWO_RS09555Not AvailablePositive2029886 - 203050622105.4
calcineurin-like phosphoesterase c-terminal domain-containing proteinKWO_RS09560Not AvailablePositive2030673 - 203225957517.4
c13 family peptidaseKWO_RS09570Not AvailableNegative2032712 - 203378838510.3
Ncrna_class:otherNot AvailableNot AvailablePositive2033996 - 2034069Not Available
acireductone synthaseKWO_RS09580Not AvailableNegative2034127 - 203482525946.5
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenaseKWO_RS09585Not AvailableNegative2034828 - 203539421320.0
methylthioribulose 1-phosphate dehydrataseKWO_RS09590Not AvailableNegative2035430 - 203608324232.1
amino acid permeaseKWO_RS09595Not AvailableNegative2036173 - 203760350901.7
amino acid permeaseKWO_RS09600Not AvailableNegative2037680 - 203915251769.5

Displaying genes 1871 – 1880 of 4227 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.