Xanthomonas vasicola pv. arecae strain NCPPB 2649

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vasicola pv. arecae strain NCPPB 2649 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This strain is notable for having two replicons, which may play a role in its genetic regulation and adaptability within its ecological niche. The strain is cataloged under the accessions NZ_CP034653.1 and NZ_CP034654.1, indicating its genetic sequences are available for further study and analysis. These sequences can provide insights into the genetic mechanisms that underlie its pathogenicity, metabolism, and interactions with host plants. Understanding Xanthomonas vasicola pv. arecae is vital, as it is known to be a pathogen affecting areca palm (Areca catechu), which is economically significant in tropical regions. The rod shape and flagellar motility may enhance its ability to colonize host tissues and facilitate the spread of infection. This highlights the ecological importance of studying such microorganisms, as their interactions with plant hosts can have direct implications for agriculture and crop management. By exploring the traits and genetic information of Xanthomonas vasicola pv. arecae, researchers can better understand its role in plant pathology and develop effective strategies for disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vasicola
Strainpv. arecae strain NCPPB 2649

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vasicola pv. arecae strain NCPPB 2649
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vasicola pv. arecae strain NCPPB 2649 plasmid

Gene Summary

Adenine Count

5789 bp

Thymine Count

5548 bp

Guanine Count

9035 bp

Cytosine Count

8843 bp

Genome Length

29215 bp

Protein-coding Genes

37 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNX80_RS20180Not AvailableNegative4345294 - 434617831592.8
bifunctional isocitrate dehydrogenase kinase/phosphataseNX80_RS20185Not AvailableNegative4346239 - 434797866655.6
lysr substrate-binding domain-containing proteinNX80_RS20190Not AvailableNegative4347975 - 434892234815.1
tetratricopeptide repeat proteinNX80_RS20195Not AvailablePositive4349025 - 43492778964.5
nadp-dependent isocitrate dehydrogenaseNX80_RS20200Not AvailableNegative4349352 - 435158380398.6
swim zinc finger family proteinNX80_RS20205Not AvailablePositive4351787 - 435348763677.5
crispr-associated endonuclease cas3''NX80_RS20210Not AvailablePositive4353651 - 435594585246.2
type i-c crispr-associated protein cas5cNX80_RS20215Not AvailablePositive4356431 - 435710524971.0
type i-c crispr-associated protein cas8c/csd1NX80_RS20220Not AvailablePositive4357102 - 435894666717.8
type i-c crispr-associated protein cas7/csd2NX80_RS20225Not AvailablePositive4358943 - 435982132958.3

Displaying genes 3901 – 3910 of 4399 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.