Xanthomonas vasicola pv. arecae strain NCPPB 2649

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vasicola pv. arecae strain NCPPB 2649 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This strain is notable for having two replicons, which may play a role in its genetic regulation and adaptability within its ecological niche. The strain is cataloged under the accessions NZ_CP034653.1 and NZ_CP034654.1, indicating its genetic sequences are available for further study and analysis. These sequences can provide insights into the genetic mechanisms that underlie its pathogenicity, metabolism, and interactions with host plants. Understanding Xanthomonas vasicola pv. arecae is vital, as it is known to be a pathogen affecting areca palm (Areca catechu), which is economically significant in tropical regions. The rod shape and flagellar motility may enhance its ability to colonize host tissues and facilitate the spread of infection. This highlights the ecological importance of studying such microorganisms, as their interactions with plant hosts can have direct implications for agriculture and crop management. By exploring the traits and genetic information of Xanthomonas vasicola pv. arecae, researchers can better understand its role in plant pathology and develop effective strategies for disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vasicola
Strainpv. arecae strain NCPPB 2649

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vasicola pv. arecae strain NCPPB 2649
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vasicola pv. arecae strain NCPPB 2649 plasmid

Gene Summary

Adenine Count

5789 bp

Thymine Count

5548 bp

Guanine Count

9035 bp

Cytosine Count

8843 bp

Genome Length

29215 bp

Protein-coding Genes

37 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna ligase dNX80_RS11685Not AvailablePositive2549939 - 255256996699.8
ribonuclease dNX80_RS11690Not AvailableNegative2552646 - 255373741117.3
Ncrna_class:otherNot AvailableNot AvailablePositive2553945 - 2554020Not Available
formylglycine-generating enzyme family proteinNX80_RS11705Not AvailablePositive2554060 - 255584464429.0
virulence factorNX80_RS11710Not AvailablePositive2556354 - 255761645072.3
exodeoxyribonuclease vii large subunitNX80_RS11715Not AvailableNegative2557911 - 255924849364.4
trna epoxyqueuosine(34) reductase quegNX80_RS11720Not AvailableNegative2559394 - 256046139733.4
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseNX80_RS11725Not AvailablePositive2560486 - 256197350585.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeNX80_RS11730Not AvailablePositive2561970 - 256247017756.1
n-acetylmuramoyl-l-alanine amidaseNX80_RS11735Not AvailablePositive2562541 - 256425657667.6

Displaying genes 2291 – 2300 of 4399 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.