Burkholderia cenocepacia strain YG-3

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cenocepacia strain YG-3 is a Gram-negative, rod-shaped bacterium characterized by its facultative aerobic metabolism and motility, facilitated by the presence of flagella. This strain has a mesophilic temperature range, indicating its optimal growth occurs within moderate temperature conditions. Notably, B. cenocepacia YG-3 possesses two replicons and two membranes, a characteristic feature of many bacteria that contributes to its cellular organization and function. In terms of habitat, B. cenocepacia YG-3 is found in multiple environments, demonstrating its adaptability and resilience. It engages in a free-living biotic relationship, allowing it to thrive independently rather than relying on a host for survival. However, it is important to note that it can interact with hosts, including Homo sapiens, which is significant in the context of human health. One notable aspect of B. cenocepacia YG-3 is that it does not undergo sporulation, which may influence its survival strategy in various environments. The strain is cataloged under accessions NZ_CP034545.1 and NZ_CP034546.1, indicating its availability for research and study. Ecologically, the adaptability of B. cenocepacia YG-3 to diverse habitats and its free-living nature suggest it plays a role in nutrient cycling and microbial community dynamics in its environments. Its interactions with human hosts may also indicate its potential relevance in clinical microbiology, particularly concerning infections in immunocompromised individuals.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cenocepacia
Strainstrain YG-3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Burkholderia cenocepacia strain YG-3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Caenorhabditis elegans
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Burkholderia cenocepacia strain YG-3 chromosome 2, complete

Gene Summary

Adenine Count

227087 bp

Thymine Count

226710 bp

Guanine Count

451942 bp

Cytosine Count

445109 bp

Genome Length

1350848 bp

Protein-coding Genes

1196 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fmdb family zinc ribbon proteinD5R55_RS15165Not AvailableNegative3164085 - 316443511170.9
sam-dependent methyltransferaseD5R55_RS15170Not AvailableNegative3164532 - 316515822763.0
ubiquinone biosynthesis regulatory protein kinase ubibD5R55_RS15175Not AvailableNegative3165175 - 316675259897.2
scp2 domain-containing proteinD5R55_RS15180Not AvailableNegative3166765 - 316739122479.7
tim44 domain-containing proteinD5R55_RS15185Not AvailableNegative3167556 - 316858135928.4
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieD5R55_RS15190Not AvailableNegative3168623 - 316935427108.7
gamma-butyrobetaine hydroxylase-like domain-containing proteinD5R55_RS15195Not AvailableNegative3169407 - 316982014972.6
hit family proteinD5R55_RS15200Not AvailableNegative3169817 - 317026016830.1
duf3683 domain-containing proteinD5R55_RS15205Not AvailableNegative3170346 - 3174371148732.0
threonine ammonia-lyase, biosyntheticD5R55_RS15215Not AvailablePositive3174972 - 317649555423.0

Displaying genes 4131 – 4140 of 4576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.