Iodobacter ciconiae strain H11R3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chitinibacteraceae

Genus

Iodobacter

Description

Iodobacter ciconiae strain H11R3 is characterized by a single replicon, which is indicative of its genomic organization. The complete genomic sequence of this strain is accessible under the accession number NZ_CP034433.1. This strain belongs to the genus Iodobacter, which is known for its unique ability to reduce iodate to iodide, a trait that may have implications in biogeochemical cycles and environmental iodine dynamics. The presence of only one replicon is significant as it may influence the genetic stability and replication efficiency of the organism. This feature allows for a streamlined genetic architecture, which may contribute to its adaptability in various environments. The genomic data available provides insights into the metabolic pathways and potential ecological roles of Iodobacter ciconiae strain H11R3. In terms of ecology, the ability of Iodobacter species to participate in the reduction of iodate could play a crucial role in iodine cycling within aquatic ecosystems, particularly in areas where iodine is a limiting nutrient. The implications of such metabolic capabilities extend to the understanding of nutrient dynamics and the health of ecosystems influenced by iodine availability. Thus, Iodobacter ciconiae strain H11R3 serves as a relevant organism for further studies on iodine biogeochemistry and microbial interactions in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChitinibacteraceae
GenusIodobacter
SpeciesIodobacter ciconiae
Strainstrain H11R3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Iodobacter ciconiae strain H11R3 chromosome, complete genome.

Gene Summary

Adenine Count

992799 bp

Thymine Count

1021820 bp

Guanine Count

951418 bp

Cytosine Count

911340 bp

Genome Length

3877377 bp

Protein-coding Genes

3313 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i secretion system permease/atpaseEJO50_RS06320Not AvailablePositive1444556 - 144670979316.1
30s ribosomal protein s2EJO50_RS06325Not AvailablePositive1446971 - 144769326601.3
translation elongation factor tsEJO50_RS06330Not AvailablePositive1447842 - 144871730930.5
ump kinaseEJO50_RS06335Not AvailablePositive1448851 - 144957025627.3
ribosome recycling factorEJO50_RS06340Not AvailablePositive1449675 - 145023220895.2
isoprenyl transferaseEJO50_RS06345Not AvailablePositive1450291 - 145104328758.3
phosphatidate cytidylyltransferaseEJO50_RS06350Not AvailablePositive1451037 - 145186429372.3
1-deoxy-d-xylulose-5-phosphate reductoisomeraseEJO50_RS06355Not AvailablePositive1452038 - 145325243469.7
rip metalloprotease rsepEJO50_RS06360Not AvailablePositive1453246 - 145459548590.8
outer membrane protein assembly factor bamaEJO50_RS06365Not AvailablePositive1454725 - 145701384307.2

Displaying genes 1281 – 1290 of 3463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.