Iodobacter ciconiae strain H11R3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chitinibacteraceae

Genus

Iodobacter

Description

Iodobacter ciconiae strain H11R3 is characterized by a single replicon, which is indicative of its genomic organization. The complete genomic sequence of this strain is accessible under the accession number NZ_CP034433.1. This strain belongs to the genus Iodobacter, which is known for its unique ability to reduce iodate to iodide, a trait that may have implications in biogeochemical cycles and environmental iodine dynamics. The presence of only one replicon is significant as it may influence the genetic stability and replication efficiency of the organism. This feature allows for a streamlined genetic architecture, which may contribute to its adaptability in various environments. The genomic data available provides insights into the metabolic pathways and potential ecological roles of Iodobacter ciconiae strain H11R3. In terms of ecology, the ability of Iodobacter species to participate in the reduction of iodate could play a crucial role in iodine cycling within aquatic ecosystems, particularly in areas where iodine is a limiting nutrient. The implications of such metabolic capabilities extend to the understanding of nutrient dynamics and the health of ecosystems influenced by iodine availability. Thus, Iodobacter ciconiae strain H11R3 serves as a relevant organism for further studies on iodine biogeochemistry and microbial interactions in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChitinibacteraceae
GenusIodobacter
SpeciesIodobacter ciconiae
Strainstrain H11R3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Iodobacter ciconiae strain H11R3 chromosome, complete genome.

Gene Summary

Adenine Count

992799 bp

Thymine Count

1021820 bp

Guanine Count

951418 bp

Cytosine Count

911340 bp

Genome Length

3877377 bp

Protein-coding Genes

3313 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is3 family transposaseEJO50_RS04985Not AvailablePositive1128403 - 113037272352.1
type iii secretion system chaperone spakEJO50_RS04990Not AvailablePositive1130389 - 113079615509.5
type iii secretion system atpase sctnEJO50_RS04995Not AvailablePositive1130796 - 113208547100.6
type iii needle complex assembly proteinEJO50_RS05000Not AvailablePositive1132114 - 113252716905.4
type iii secretion system needle length determinant, span/eivj familyEJO50_RS05005Not AvailablePositive1132512 - 113337530670.0
flim/flin family flagellar motor switch proteinEJO50_RS05010Not AvailablePositive1133372 - 113425932620.7
escr/yscr/hrcr family type iii secretion system export apparatus proteinEJO50_RS05015Not AvailablePositive1134249 - 113490824138.0
escs/yscs/hrcs family type iii secretion system export apparatus proteinEJO50_RS05020Not AvailablePositive1134936 - 11351969708.18
type iii secretion system export apparatus subunit scttEJO50_RS05025Not AvailablePositive1135196 - 113596027463.4
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinEJO50_RS05030Not AvailablePositive1135961 - 113700739166.6

Displaying genes 1011 – 1020 of 3463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.