Escherichia coli strain RS571

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain RS571 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is facultatively anaerobic and thrives optimally at 37°C, placing it within a mesophilic temperature range. E. coli RS571 is characterized by its typical arrangement in pairs and singles, and it possesses two membranes and three replicons. This strain is notably free-living and is associated with a wide variety of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other mammals, birds, and even plants such as Solanum lycopersicum and Brassica oleracea var. italica. The diverse host range indicates its ecological versatility and potential for interaction with multiple biological systems. E. coli strain RS571 is associated with a range of health effects, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, and various other serious conditions such as neonatal meningitis, sepsis, and hemolytic uremic syndrome (HUS). Its pathogenicity underscores the importance of understanding microbial interactions within host organisms and the potential impacts on human health. The strain's adaptability to different environments and hosts reflects its ecological role as a significant pathogen and commensal organism, emphasizing the complex relationships between microbes and their hosts. Understanding these dynamics is crucial for developing strategies to manage infections and improve public health outcomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain RS571

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain RS571
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain RS571


Gene Summary

Adenine Count

1066 bp

Thymine Count

1002 bp

Guanine Count

616 bp

Cytosine Count

507 bp

Genome Length

3191 bp

Protein-coding Genes

4 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 8 proteinEJH97_RS26380Not AvailablePositive1 - 71127516.0
lipopolysaccharide core heptose(ii) kinase rfayEJH97_RS26385Not AvailablePositive721 - 141327023.9
udp-galactose--(galactosyl) lps alpha1,2-galactosyltransferaseEJH97_RS26390Not AvailablePositive1439 - 246739369.9
glycosyltransferase family 25 proteinEJH97_RS26395Not AvailablePositive2499 - 319127338.2
type iii secretion system effector espx1EJH97_RS26400Not AvailablePositive1 - 130045531.9
repb family plasmid replication initiator proteinEJH97_RS24960Not AvailablePositive1 - 87633238.4
hypothetical proteinEJH97_RS24970Not AvailablePositive2025 - 237812331.5
type iv conjugative transfer system protein tralEJH97_RS24975Not AvailablePositive2429 - 274612257.1
trae/trak family type iv conjugative transfer system proteinEJH97_RS24980Not AvailablePositive2758 - 354629314.2
type-f conjugative transfer system secretin trakEJH97_RS24985Not AvailablePositive3546 - 481745264.5

Displaying genes 1 – 10 of 279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total