Tabrizicola piscis strain K13M18

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Tabrizicola

Description

Tabrizicola piscis strain K13M18 is characterized by having three replicons, which may suggest a complex genomic organization potentially beneficial for adaptability and metabolic diversity. The strain is documented under several accessions: NZ_CP034328.1, NZ_CP034331.1, and NZ_CP034332.1, indicating its presence in multiple genomic databases. The three replicons may allow Tabrizicola piscis K13M18 to efficiently regulate a variety of cellular processes and respond to environmental changes. This genomic feature can enhance the strain's survival in diverse ecological niches, particularly in aquatic environments where it may encounter fluctuating conditions. Understanding the genomic structure of Tabrizicola piscis strain K13M18 could provide insights into its ecological roles, such as nutrient cycling or interactions with other microorganisms in aquatic ecosystems. This information is vital for further studies on microbial ecology and the potential applications of Tabrizicola piscis in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusTabrizicola
SpeciesTabrizicola piscis
Strainstrain K13M18

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tabrizicola piscis strain K13M18 plasmid unnamed3, complete

Gene Summary

Adenine Count

4401 bp

Thymine Count

3954 bp

Guanine Count

6592 bp

Cytosine Count

6510 bp

Genome Length

21457 bp

Protein-coding Genes

20 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglutaminase domain-containing proteinEI545_RS03885Not AvailableNegative807438 - 80824428261.3
alpha-e domain-containing proteinEI545_RS03890Not AvailableNegative808244 - 80919435502.3
circularly permuted type 2 atp-grasp proteinEI545_RS03895Not AvailableNegative809391 - 81078251573.1
ligase-associated dna damage response exonucleaseEI545_RS03900Not AvailablePositive811368 - 81237835913.6
winged helix-turn-helix transcriptional regulatorEI545_RS03905Not AvailableNegative812385 - 81271412269.8
hydrolaseEI545_RS03910Not AvailablePositive812818 - 81345322666.1
atp-dependent dna ligaseEI545_RS03915Not AvailablePositive813513 - 81510558579.2
efflux rnd transporter periplasmic adaptor subunitEI545_RS03920Not AvailableNegative815102 - 81628341107.3
abc transporter permeaseEI545_RS03925Not AvailableNegative816300 - 81866083688.5
abc transporter atp-binding proteinEI545_RS03930Not AvailableNegative818654 - 81936725369.2

Displaying genes 831 – 840 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.