Tabrizicola piscis strain K13M18

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Tabrizicola

Description

Tabrizicola piscis strain K13M18 is characterized by having three replicons, which may suggest a complex genomic organization potentially beneficial for adaptability and metabolic diversity. The strain is documented under several accessions: NZ_CP034328.1, NZ_CP034331.1, and NZ_CP034332.1, indicating its presence in multiple genomic databases. The three replicons may allow Tabrizicola piscis K13M18 to efficiently regulate a variety of cellular processes and respond to environmental changes. This genomic feature can enhance the strain's survival in diverse ecological niches, particularly in aquatic environments where it may encounter fluctuating conditions. Understanding the genomic structure of Tabrizicola piscis strain K13M18 could provide insights into its ecological roles, such as nutrient cycling or interactions with other microorganisms in aquatic ecosystems. This information is vital for further studies on microbial ecology and the potential applications of Tabrizicola piscis in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusTabrizicola
SpeciesTabrizicola piscis
Strainstrain K13M18

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tabrizicola piscis strain K13M18 plasmid unnamed3, complete

Gene Summary

Adenine Count

4401 bp

Thymine Count

3954 bp

Guanine Count

6592 bp

Cytosine Count

6510 bp

Genome Length

21457 bp

Protein-coding Genes

20 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tsseEI545_RS12570Not AvailablePositive2568833 - 256954926811.0
type vi secretion system baseplate subunit tssfEI545_RS12575Not AvailablePositive2569551 - 257143168473.6
type vi secretion system baseplate subunit tssgEI545_RS12580Not AvailablePositive2571395 - 257245638768.5
type vi secretion system-associated fha domain protein taghEI545_RS12585Not AvailablePositive2572453 - 257381448102.9
type vi secretion system lipoprotein tssjEI545_RS12590Not AvailablePositive2573811 - 257426915249.5
type vi secretion system baseplate subunit tsskEI545_RS12595Not AvailablePositive2574295 - 257562647606.0
type vi secretion system protein tssl, long formEI545_RS12600Not AvailablePositive2575645 - 257705749282.6
type vi secretion system membrane subunit tssmEI545_RS12605Not AvailablePositive2577062 - 2580625128113.0
tagf domain-containing proteinEI545_RS12610Not AvailablePositive2580625 - 258115218033.5
type vi secretion system vgr family proteinEI545_RS12615Not AvailableNegative2581124 - 258342783589.9

Displaying genes 2581 – 2590 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.