Tabrizicola piscis strain K13M18

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Tabrizicola

Description

Tabrizicola piscis strain K13M18 is characterized by having three replicons, which may suggest a complex genomic organization potentially beneficial for adaptability and metabolic diversity. The strain is documented under several accessions: NZ_CP034328.1, NZ_CP034331.1, and NZ_CP034332.1, indicating its presence in multiple genomic databases. The three replicons may allow Tabrizicola piscis K13M18 to efficiently regulate a variety of cellular processes and respond to environmental changes. This genomic feature can enhance the strain's survival in diverse ecological niches, particularly in aquatic environments where it may encounter fluctuating conditions. Understanding the genomic structure of Tabrizicola piscis strain K13M18 could provide insights into its ecological roles, such as nutrient cycling or interactions with other microorganisms in aquatic ecosystems. This information is vital for further studies on microbial ecology and the potential applications of Tabrizicola piscis in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusTabrizicola
SpeciesTabrizicola piscis
Strainstrain K13M18

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tabrizicola piscis strain K13M18 plasmid unnamed3, complete

Gene Summary

Adenine Count

4401 bp

Thymine Count

3954 bp

Guanine Count

6592 bp

Cytosine Count

6510 bp

Genome Length

21457 bp

Protein-coding Genes

20 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase large subunitEI545_RS08980Not AvailableNegative1855922 - 185734350718.9
soul family heme-binding proteinEI545_RS08985Not AvailablePositive1857631 - 185817319828.4
ribosome silencing factorEI545_RS08990Not AvailablePositive1858593 - 185893412700.3
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhEI545_RS08995Not AvailablePositive1858934 - 185940416741.3
dmt family transporterEI545_RS09000Not AvailableNegative1859410 - 186021627542.6
trans-3-hydroxy-l-proline dehydrataseEI545_RS09005Not AvailableNegative1860275 - 186130336718.0
4-hydroxy-tetrahydrodipicolinate synthaseEI545_RS09010Not AvailableNegative1861410 - 186228230343.9
lytic transglycosylase domain-containing proteinEI545_RS09015Not AvailablePositive1862433 - 186437370190.0
ion channelEI545_RS09020Not AvailableNegative1864370 - 186481015964.2
ssra-binding protein smpbEI545_RS09025Not AvailablePositive1864860 - 186533918122.0

Displaying genes 1861 – 1870 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.