Epilithonimonas vandammei strain F5649

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Epilithonimonas

Description

Epilithonimonas vandammei strain F5649 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This strain is cataloged under the accession NZ_CP034161.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Epilithonimonas vandammei possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group. This structural characteristic often contributes to the organism's resilience and adaptability in various environments. The single replicon suggests a streamlined genomic organization, which may influence the bacterium's replication and functional capabilities. This trait can be relevant for understanding its metabolism, growth, and response to environmental stresses. From an ecological perspective, the genus Epilithonimonas is typically associated with biofilms in aquatic environments, where they may play a role in nutrient cycling and the degradation of organic matter. The presence of Epilithonimonas vandammei strain F5649 in such habitats may contribute to the ecological balance and health of these ecosystems, highlighting the importance of studying microbial diversity and its functional implications in natural settings.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusEpilithonimonas
SpeciesEpilithonimonas vandammei
Strainstrain F5649

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Epilithonimonas vandammei strain F5649 chromosome, complete

Gene Summary

Adenine Count

1044644 bp

Thymine Count

1051576 bp

Guanine Count

587673 bp

Cytosine Count

592498 bp

Genome Length

3276391 bp

Protein-coding Genes

3008 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-4-dehydrorhamnose reductaseEIB74_RS00310Not AvailableNegative61946 - 6281532686.2
acyl-coa thioesteraseEIB74_RS00315Not AvailableNegative62818 - 6330018907.6
omph family outer membrane proteinEIB74_RS00320Not AvailableNegative63361 - 6386418353.1
omph family outer membrane proteinEIB74_RS00325Not AvailableNegative63893 - 6454324260.0
outer membrane protein assembly factor bamaEIB74_RS00330Not AvailableNegative64565 - 6709994976.3
isoprenyl transferaseEIB74_RS00335Not AvailableNegative67130 - 6788228858.7
duf6089 family proteinEIB74_RS00340Not AvailableNegative67888 - 6867929611.3
exopolysaccharide transport family proteinEIB74_RS00345Not AvailableNegative68862 - 7135794389.4
polysaccharide biosynthesis/export family proteinEIB74_RS00350Not AvailableNegative71360 - 7224132123.6
glycosyltransferase family 4 proteinEIB74_RS00355Not AvailableNegative72271 - 7337441360.3

Displaying genes 61 – 70 of 3064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC11205806
CellulitisCausesPMC11205806
SepsisCausesPMC11205806

Displaying health effects 1 – 3 of 3 in total